PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G26490.1   Phototropic-responsive NPH3 family protein

Lab Annot. phototropic-responsive NPH3 protein
Mapman: 30.11 signalling.light
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G26490.4 11Arabidopsis thaliana05881001000 (0)_
AT3G26490.3 11Arabidopsis thaliana05881001000 (0)_
AT3G26490.2 11Arabidopsis thaliana04571001000 (0)_
Os12g39380.1 7Oryza sativa1E-13155440610 (0)_
Os02g38120.1 7Oryza sativa7E-12954640580 (0)_
Os04g40100.1 7Oryza sativa3E-12754639580 (0)_
Zm00001eb079670_P001 agpv5Zea mays3E-13364438540 (0)_
GRMZM2G025880_P01 3.21Zea mays3E-13364438540 (0)_
v1_GRMZM2G025880_P01 4a53Zea mays3E-13364438540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NPH3(2)
TargetP: Cytoplasm (Class 2 C0.117; M0.052; S0.077; _0.833)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 588 aa (-cTP 531)
Molecular Weight 66.35 kDA(-cTP )
PI 8.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help