PPDB

 The Plant Proteome Database

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AT3G26460.1   Polyketide cyclase/dehydrase and lipid transport superfamily protein
Lab Annot. Polyketide cyclase/dehydrase and lipid transport protein
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G26450.1 11Arabidopsis thaliana2E-991528693245 (151)_
AT2G01520.1 11Arabidopsis thaliana1E-85152758857 (32)_
AT4G14060.1 11Arabidopsis thaliana3E-85152758741 (19)_
Os04g39150.1 7Oryza sativa1E-07158234639 (39)_
Zm00001eb080380_P001 agpv5Zea mays1E-0815524440 (0)_
v1_GRMZM2G102356_P01 4a53Zea mays1E-08155244437 (37)_
GRMZM2G102356_P01 3.21Zea mays1E-08155244441 (41)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Bet_v_1(1) MRP-S34(1)
TargetP: Cytoplasm (Class 3 C0.102; M0.219; S0.109; _0.804)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 152 aa (-cTP 148)
Molecular Weight 17.77 kDA(-cTP )
PI 5.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 16400686(floem_sap B. napa)
18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help