PPDB

PPDB	The Plant Proteome Database

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AT3G26400.1 eukaryotic translation initiation factor 4B1

Lab Annot.

eukaryotic translation initiation factor 4B1
Mapman: 29.2.3 protein.synthesis.initiation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13020.1 11 Arabidopsis thaliana 0 571 68 76 7 (7) _
AT4G38710.2 11 Arabidopsis thaliana 6E-23 332 37 46 23 (2) _
AT4G38710.1 11 Arabidopsis thaliana 1E-20 453 32 42 23 (2) _
Os02g38220.1 7 Oryza sativa 2E-94 533 45 56 15 (15) _
Os04g40400.1 7 Oryza sativa 1E-85 495 42 53 4 (4) _
Os01g19990.1 7 Oryza sativa 5E-06 43 58 79 0 (0) _
GRMZM2G066815_P01 3.21 Zea mays 6E-94 591 42 52 1 (1) _
Zm00001eb424960_P001 agpv5 Zea mays 6E-94 591 42 52 0 (0) _
v1_GRMZM2G066815_P02 4a53 Zea mays 6E-94 591 42 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CCDC24(3) eIF-4B(1)
TargetP:	Cytoplasm (Class 2 C0.099; M0.115; S0.039; _0.822)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	532 aa (-cTP 487)
Molecular Weight	57.72 kDA(-cTP )
PI	7.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2250	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data