PPDB

The Plant Proteome Database

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AT3G26380.1   Melibiase family protein

Lab Annot. alpha-galactosidase/hydrolase, melibiase
Mapman: 3.8.2 minor CHO metabolism.galactose.alpha-galactosidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G26380.2 11Arabidopsis thaliana04751001000 (0)_
AT3G56310.1 11Arabidopsis thaliana1E-203822640123 (69)S
AT5G08370.1 11Arabidopsis thaliana1E-1738124404 (4)S
Os01g33420.1 7Oryza sativa062352680 (0)M
Os10g35110.1 7Oryza sativa2E-1935024419 (9)S
Os10g35110.2 7Oryza sativa2E-1935024419 (9)S
Zm00001eb409230_P003 agpv5Zea mays056549650 (0)_
GRMZM2G028307_P02 3.21Zea mays061751680 (0)M
Zm00001eb409230_P001 agpv5Zea mays061751680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Melibiase_2(2) Melibiase_C(1) RicinB_lectin_2(2)
TargetP: Cytoplasm (Class 5 C0.066; M0.274; S0.168; _0.355)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 647 aa (-cTP 642)
Molecular Weight 72.34 kDA(-cTP )
PI 8.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1351Detail       leaf [A. thaliana] total tissue t1-t2
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
17216043(leaf)
20706207(contaminants cell cycle interactome (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21166475(cytosolic-fractions-crude)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help