PPDB

 The Plant Proteome Database

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AT3G26080.1   plastid-lipid associated protein PAP / fibrillin family protein
Lab Annot. fibrillin 3b (FBN3b)
Mapman: 26.31* misc.fibrillins
Curated Location thylakoid-peripheral-stromal-side (Pubmed: 23198870 18431481 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G26080.2 11Arabidopsis thaliana6E-16826388880 (0)C
AT3G26070.1 11Arabidopsis thaliana8E-1432438388278 (268)C
AT4G22240.1 11Arabidopsis thaliana8E-062622439749 (652)C
Os03g49720.1 7Oryza sativa1E-67176577538 (38)C
Os04g34460.1 7Oryza sativa3E-0623126410 (0)C
Zm00001eb054390_P001 agpv5Zea mays3E-7317759770 (0)C
GRMZM2G153444_P01 3.21Zea mays1E-721775977142 (129)C
v1_GRMZM2G153444_P01 4a53Zea mays1E-721775977129 (129)C

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PAP_fibrillin(2)
TargetP: Chloroplast (Class 4 C0.429; M0.121; S0.021; _0.221)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 234 aa (-cTP 189)
Molecular Weight 26.25 kDA(-cTP 21.37)
PI 9.56(-cTP 9.28)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
48Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1679Detail       Rosettes [A. thaliana]  
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1830Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1831Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Normal light
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 14729914(thylakoid stripped)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19714877(interactomes 14-3-3 complexes (cell culture))
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help