PPDB

PPDB	The Plant Proteome Database

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AT3G25970.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13650.1 11 Arabidopsis thaliana 2E-141 662 34 57 1 (1) _
AT2G27610.1 11 Arabidopsis thaliana 2E-138 677 34 57 3 (3) M
AT3G09040.1 11 Arabidopsis thaliana 2E-126 668 33 55 0 (0) M
Os08g28830.1 7 Oryza sativa 0 657 46 66 0 (0) M
Os12g36620.1 7 Oryza sativa 2E-142 674 36 56 0 (0) _
Os04g49520.1 7 Oryza sativa 7E-129 766 31 52 0 (0) M
v1_GRMZM2G168170_P01 4a53 Zea mays 0 676 45 64 0 (0) M
GRMZM2G168170_P01 3.21 Zea mays 0 676 45 64 0 (0) M
Zm00001eb032320_P001 agpv5 Zea mays 0 676 45 64 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) MNE1(3) PPR(14) PPR_1(11) PPR_2(12) PPR_3(8) PPR_long(4)
TargetP:	Secreted (Class 4 C0.028; M0.128; S0.687; _0.358)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	701 aa (-cTP 696)
Molecular Weight	78.18 kDA(-cTP )
PI	5.75(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data