PPDB

PPDB	The Plant Proteome Database

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AT3G25940.1 TFIIB zinc-binding protein

Lab Annot.

Mapman: 27.3.50 RNA.regulation of transcription.General Transcription

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20065.3 11 Arabidopsis thaliana 1E-32 62 83 91 0 (0) S
AT1G20065.4 11 Arabidopsis thaliana 1E-32 62 83 91 0 (0) S
AT1G20065.5 11 Arabidopsis thaliana 1E-32 62 83 91 0 (0) S
Os03g50380.1 7 Oryza sativa 8E-34 118 51 61 2 (2) S
GRMZM5G800853_P01 3.21 Zea mays 4E-29 114 47 59 0 (0) S
Zm00001eb054840_P001 agpv5 Zea mays 4E-29 114 47 59 0 (0) S
v1_GRMZM2G009673_P02 4a53 Zea mays 4E-29 114 47 59 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	A2L_zn_ribbon(3) Baculo_IE-1(1) Baculo_LEF5_C(2) C1_1(2) Churchill(1) DUF3797(2)
TargetP:	Cytoplasm (Class 5 C0.045; M0.112; S0.471; _0.617)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	119 aa (-cTP 97)
Molecular Weight	13.58 kDA(-cTP )
PI	6.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data