PPDB

 The Plant Proteome Database

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AT3G25780.1   allene oxide cyclase 3
Lab Annot. allene oxide cyclase 3 (OAC3;ERD12-3)
Mapman: 17.7.1.4 hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase
Curated Location plastid (Pubmed: 23198870 18393998 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25770.1 11Arabidopsis thaliana9E-1382557685475 (417)C
AT1G13280.1 11Arabidopsis thaliana8E-1372447784277 (222)C
AT3G25760.1 11Arabidopsis thaliana7E-1312587585309 (279)C
Os03g32314.1 7Oryza sativa1E-90206627744 (44)C
v1_GRMZM2G415793_P01 4a53Zea mays4E-89196627811 (11)C
Zm00001eb393530_P002 agpv5Zea mays4E-8919662780 (0)C
GRMZM2G415793_P01 3.21Zea mays4E-89196627813 (10)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Allene_ox_cyc(1) Dirigent(1)
TargetP: Chloroplast (Class 1 C0.984; M0.033; S0.007; _0.026)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 202)
Molecular Weight 28.40 kDA(-cTP 22.37)
PI 9.19(-cTP 8.70)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
120Detail       root [B. rapa] plastid stroma 
324Detail       leaf [A. thaliana] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
1650Detail       leaf [A. thaliana] plastoglobules plastoglobulem48
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1830Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(PlasmaMembrane-LOPIT-callus)
17151019(vacuole - suspension cell)
17916636(root (NaCl stress))
17432890(leaf total membranes)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
21693672(wound-regulated leaf proteome (AOS mutant))
21173025(root proteome)

Comparative Proteomics Data

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