PPDB

The Plant Proteome Database

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AT3G25545.1   trigger factor

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g11970.1 7Oryza sativa5E-28223375616 (16)_
v1_GRMZM2G435589_P01 4a53Zea mays2E-2427530464 (4)_
Zm00001eb119820_P001 agpv5Zea mays2E-2427530460 (0)_
GRMZM2G435589_P01 3.21Zea mays2E-2427530465 (5)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PAC1(1) PAC2(2)
TargetP: Cytoplasm (Class 3 C0.188; M0.092; S0.006; _0.740)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 267 aa (-cTP 178)
Molecular Weight 29.39 kDA(-cTP )
PI 5.55(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help