PPDB

 The Plant Proteome Database

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AT3G25540.1   TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Lab Annot.
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25540.3 11Arabidopsis thaliana03101001000 (0)_
AT1G13580.2 11Arabidopsis thaliana031177870 (0)_
AT1G13580.3 11Arabidopsis thaliana031177870 (0)_
Os02g37080.1 7Oryza sativa3E-14530263830 (0)_
Os02g49590.1 7Oryza sativa6E-13930861780 (0)_
Os02g37080.2 7Oryza sativa3E-10823063810 (0)_
Zm00001eb245340_P001 agpv5Zea mays2E-14931562830 (0)_
Zm00001eb311390_P001 agpv5Zea mays2E-14830964790 (0)_
Zm00001eb183320_P001 agpv5Zea mays3E-14831762820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: TRAM_LAG1_CLN8(1)
TargetP: Cytoplasm (Class 2 C0.049; M0.141; S0.167; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 310 aa (-cTP 256)
Molecular Weight 36.50 kDA(-cTP )
PI 7.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help