PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G25270.1   Ribonuclease H-like superfamily protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G04420.1 11Arabidopsis thaliana8E-9622058760 (0)M
AT2G02650.1 11Arabidopsis thaliana3E-6834135520 (0)_
AT2G33160.1 11Arabidopsis thaliana6E-6525941620 (0)S
Os02g44460.1 7Oryza sativa4E-2932729450 (0)_
Os11g16248.1 7Oryza sativa3E-2331326450 (0)_
Os01g27640.1 7Oryza sativa9E-2327426480 (0)_
GRMZM2G169012_P01 3.21Zea mays9E-1629123400 (0)_
v1_GRMZM2G116701_P01 4a53Zea mays2E-1114425450 (0)_
GRMZM2G116701_P01 3.21Zea mays2E-1114425450 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cnd1(1) RNase_H(3) RVT_3(1) zf-RVT(2)
TargetP: Cytoplasm (Class 2 C0.225; M0.189; S0.016; _0.888)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 343 aa (-cTP 307)
Molecular Weight 40.58 kDA(-cTP )
PI 9.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help