PPDB

PPDB	The Plant Proteome Database

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AT3G25210.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G27800.1 11 Arabidopsis thaliana 2E-55 304 32 56 0 (0) M
AT5G46100.1 11 Arabidopsis thaliana 2E-28 294 27 50 0 (0) _
AT1G02060.1 11 Arabidopsis thaliana 6E-26 280 29 48 0 (0) C
Os06g08570.1 7 Oryza sativa 7E-110 330 45 68 0 (0) M
Os01g54380.1 7 Oryza sativa 3E-36 235 37 54 0 (0) M
Os07g01130.1 7 Oryza sativa 1E-24 241 27 51 0 (0) C
Zm00001eb374560_P002 agpv5 Zea mays 5E-115 328 47 69 0 (0) M
Zm00001eb374560_P001 agpv5 Zea mays 5E-115 328 47 69 0 (0) M
GRMZM2G016866_P01 3.21 Zea mays 5E-115 328 47 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(2) DnaA_N(1) PPR(7) PPR_1(6) PPR_2(7) PPR_3(4) PPR_long(3) RPM2(3)
TargetP:	Chloroplast (Class 5 C0.780; M0.606; S0.001; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	379 aa (-cTP 300)
Molecular Weight	43.25 kDA(-cTP 34.46)
PI	8.78(-cTP 8.25)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data