PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G25160.1   ER lumen protein retaining receptor family protein
Lab Annot.
Mapman: 29.3.4.1 protein.targeting.secretory pathway.ER
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38790.1 11Arabidopsis thaliana6E-11826461800 (0)M
AT1G19970.1 11Arabidopsis thaliana5E-11726459800 (0)_
AT1G75760.1 11Arabidopsis thaliana1E-11626860800 (0)M
Os08g43470.1 7Oryza sativa2E-11627060798 (8)M
Os09g36370.1 7Oryza sativa1E-11225762804 (4)S
Os08g43470.2 7Oryza sativa2E-9021858794 (4)M
GRMZM2G037655_P01 3.21Zea mays3E-117269607912 (12)M
Zm00001eb040150_P001 agpv5Zea mays3E-11726960790 (0)M
v1_GRMZM2G037655_P01 4a53Zea mays3E-11726960796 (6)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1286(4) ER_lumen_recept(2)
TargetP: Mitochondria (Class 2 C0.005; M0.845; S0.054; _0.127)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 7 TMs
TAT position:
Length 272 aa (-cTP 264)
Molecular Weight 31.03 kDA(-cTP )
PI 9.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help