PPDB

The Plant Proteome Database

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AT3G25150.2   Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein

Lab Annot. nuclear transport factor 2 (NTF2) protein / RNA recognition motif (RRM)-containing protein
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25150.1 11Arabidopsis thaliana048810010010 (8)_
AT5G60980.2 11Arabidopsis thaliana4E-774044156154 (62)_
AT5G60980.3 11Arabidopsis thaliana4E-7740441560 (0)_
Os02g29480.1 7Oryza sativa2E-79447425717 (17)_
Os04g30430.1 7Oryza sativa7E-78417425629 (29)C
Os03g30550.1 7Oryza sativa1E-7449937511 (1)_
v1_GRMZM2G091995_P02 4a53Zea mays8E-86412465810 (10)_
GRMZM2G091995_P02 3.21Zea mays8E-8641246589 (9)_
v1_GRMZM2G091995_P01 4a53Zea mays4E-85414455810 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NTF2(1) RRM_1(1)
TargetP: Chloroplast (Class 3 C0.542; M0.054; S0.076; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 587 aa (-cTP 546)
Molecular Weight 64.39 kDA(-cTP 59.64)
PI 7.69(-cTP 6.33)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1670Detail        [A. thaliana]  
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


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