PPDB

PPDB	The Plant Proteome Database

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AT3G25140.1 Nucleotide-diphospho-sugar transferases superfamily protein

Lab Annot.

Nucleotide-diphospho-sugar transferases protein
Mapman: 10.4 cell wall.pectin synthesis

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02350.1 11 Arabidopsis thaliana 0 554 67 80 2 (2) M
AT3G61130.1 11 Arabidopsis thaliana 2E-171 451 53 73 9 (9) M
AT5G47780.1 11 Arabidopsis thaliana 2E-164 469 50 68 0 (0) S
Os02g29530.1 7 Oryza sativa 0 486 71 81 0 (0) S
Os06g49810.1 7 Oryza sativa 3E-176 452 53 74 0 (0) S
Os09g36190.2 7 Oryza sativa 2E-170 454 52 72 1 (1) _
Zm00001eb241400_P001 agpv5 Zea mays 0 480 72 82 0 (0) M
v1_GRMZM2G130046_P01 4a53 Zea mays 0 480 72 82 0 (0) M
GRMZM2G130046_P01 3.21 Zea mays 0 480 72 82 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2524(3) Glyco_transf_24(1) Glyco_transf_8(1) Nbl1_Borealin_N(1)
TargetP:	Mitochondria (Class 3 C0.008; M0.877; S0.038; _0.303)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	559 aa (-cTP 516)
Molecular Weight	64.37 kDA(-cTP )
PI	8.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1

* For details about the exprimental sources click here.

Published Proteomics Data

15276431(Mitochondrial proteome)
16618929(Golgi)
15276431(mitochondrial membranes-suspension cells)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
22430844(Golgi-cell-culture)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data