PPDB

The Plant Proteome Database

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AT3G25110.1   fatA acyl-ACP thioesterase

Lab Annot.
Mapman: 11.1.7 lipid metabolism.FA synthesis and FA elongation.ACP thioesterase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13050.1 11Arabidopsis thaliana037374811 (1)C
AT1G08510.1 11Arabidopsis thaliana2E-83294466423 (6)C
Os09g32760.1 7Oryza sativa1E-171293788528 (28)M
Os09g32760.2 7Oryza sativa4E-133216848924 (24)M
Os06g05130.1 7Oryza sativa4E-7929543620 (0)C
Zm00001eb102360_P001 agpv5Zea mays7E-17229379850 (0)M
GRMZM2G102878_P03 3.21Zea mays7E-17229379851 (1)M
Zm00001eb317680_P002 agpv5Zea mays3E-17029478850 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Acyl-ACP_TE(1)
TargetP: Chloroplast (Class 5 C0.307; M0.178; S0.017; _0.109)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 362 aa (-cTP 324)
Molecular Weight 40.82 kDA(-cTP 36.32)
PI 7.08(-cTP 5.87)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2081Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help