PPDB

The Plant Proteome Database

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AT3G25070.1   RPM1 interacting protein 4

Lab Annot. RIN4 (RPM1 INTERACTING PROTEIN 4); protein binding
Mapman: 35.1 not assigned.no ontology
Curated Location plasma membrane

TAIR curated location: plasma membrane & membrane15845764,0011955429
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25070.2 11Arabidopsis thaliana9E-1552091001000 (0)M
AT5G48657.2 11Arabidopsis thaliana2E-0823027440 (0)_
AT4G35655.1 11Arabidopsis thaliana3E-086137620 (0)_
Os03g63140.1 7Oryza sativa9E-2325132480 (0)_
Os03g63140.2 7Oryza sativa9E-2325132480 (0)_
Os04g31030.1 7Oryza sativa5E-1823230460 (0)_
GRMZM2G703858_P02 3.21Zea mays2E-2318737520 (0)_
v1_GRMZM2G703858_P02 4a53Zea mays2E-2318737520 (0)_
GRMZM2G703858_P01 3.21Zea mays3E-2318737520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AvrRpt-cleavage(2)
TargetP: Cytoplasm (Class 3 C0.192; M0.133; S0.015; _0.706)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 211 aa (-cTP 133)
Molecular Weight 23.37 kDA(-cTP )
PI 9.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1494Detail       leaf [A. thaliana]  
1574Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help