PPDB

 The Plant Proteome Database

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AT3G25040.1   endoplasmic reticulum retention defective 2B
Lab Annot. endoplasmic reticulum retention defective 2B
Mapman: 29.3.4.1 protein.targeting.secretory pathway.ER
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G29330.1 11Arabidopsis thaliana2E-11121568830 (0)S
AT1G29330.2 11Arabidopsis thaliana4E-7415366810 (0)M
AT2G21190.1 11Arabidopsis thaliana5E-2722932540 (0)_
Os04g30800.2 7Oryza sativa1E-13221483900 (0)S
Os11g28340.1 7Oryza sativa6E-12521581890 (0)S
Os05g45310.1 7Oryza sativa3E-11021570806 (6)S
Zm00001eb090540_P001 agpv5Zea mays7E-11721581890 (0)S
GRMZM2G031802_P03 3.21Zea mays7E-11721581890 (0)S
GRMZM2G101413_P01 3.21Zea mays5E-10621571803 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ER_lumen_recept(1) Kelch_1(1)
TargetP: Secreted (Class 3 C0.004; M0.136; S0.825; _0.254)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 215 aa (-cTP 144)
Molecular Weight 25.56 kDA(-cTP )
PI 9.34(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
22430844(Golgi-cell-culture)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help