PPDB

PPDB	The Plant Proteome Database

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AT3G24860.1 Homeodomain-like superfamily protein

Lab Annot.

Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G44730.1 11 Arabidopsis thaliana 9E-19 107 38 64 0 (0) C
AT3G54390.1 11 Arabidopsis thaliana 6E-12 122 33 54 1 (1) _
AT3G54390.2 11 Arabidopsis thaliana 8E-12 122 33 54 0 (0) _
Os08g37810.1 7 Oryza sativa 3E-14 90 42 66 0 (0) _
Os10g41460.1 7 Oryza sativa 6E-13 116 32 56 1 (1) C
Os04g36790.1 7 Oryza sativa 4E-12 86 33 65 0 (0) _
v1_GRMZM2G428470_P01 4a53 Zea mays 2E-21 263 26 46 11 (11) _
GRMZM2G428470_P01 3.21 Zea mays 2E-21 263 26 46 0 (0) _
Zm00001eb390910_P001 agpv5 Zea mays 2E-21 263 26 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC45(1) DUF573(1) MADF_DNA_bdg(1) Myb_DNA-bind_3(1) Myb_DNA-bind_4(1) Myb_DNA-b
TargetP:	Chloroplast (Class 1 C0.986; M0.016; S0.008; _0.160)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	310 aa (-cTP 263)
Molecular Weight	35.19 kDA(-cTP 30.46)
PI	9.23(-cTP 9.25)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data