PPDB

PPDB	The Plant Proteome Database

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AT3G24800.1 proteolysis 1

Lab Annot.

E3 LIGASE PROTEOLYSIS1 (PRT1) (N-recognin)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

TAIR curated location: ubiquitin ligase complex11019805

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18660.1 11 Arabidopsis thaliana 2E-07 107 32 49 66 (13) _
AT1G18660.3 11 Arabidopsis thaliana 2E-07 107 32 49 66 (13) _
AT1G18660.2 11 Arabidopsis thaliana 2E-07 107 32 49 66 (13) _
Os02g40810.1 7 Oryza sativa 5E-94 372 43 60 0 (0) _
Os09g33740.1 7 Oryza sativa 2E-29 180 40 50 0 (0) _
Zm00001eb247460_P004 agpv5 Zea mays 1E-91 406 41 55 0 (0) _
Zm00001eb247460_P003 agpv5 Zea mays 6E-91 398 41 56 0 (0) _
GRMZM2G362883_P02 3.21 Zea mays 6E-91 398 41 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(2) Ribonuc_red_sm(1) Thioredox_DsbH(2) U-box(2) zf-C3HC4(2) zf-C3HC4
TargetP:	Cytoplasm (Class 1 C0.080; M0.119; S0.042; _0.974)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	410 aa (-cTP 381)
Molecular Weight	45.94 kDA(-cTP )
PI	4.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data