PPDB

PPDB	The Plant Proteome Database

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AT3G24670.1 Pectin lyase-like superfamily protein

Lab Annot.

pectate lyase protein
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13210.2 11 Arabidopsis thaliana 0 440 79 87 0 (0) S
AT3G07010.1 11 Arabidopsis thaliana 0 386 83 91 21 (11) S
AT4G13210.1 11 Arabidopsis thaliana 0 390 85 93 0 (0) _
Os04g05050.1 7 Oryza sativa 0 382 79 88 0 (0) S
Os04g05050.2 7 Oryza sativa 0 367 80 89 0 (0) _
Os10g31910.1 7 Oryza sativa 4E-173 381 61 75 0 (0) S
Zm00001eb420010_P002 agpv5 Zea mays 0 389 76 85 0 (0) C
v1_GRMZM2G412207_P02 4a53 Zea mays 0 369 78 87 0 (0) _
v1_GRMZM2G131912_P01 4a53 Zea mays 0 382 78 87 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) NosD(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 1 C0.034; M0.026; S0.966; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	440 aa (-cTP 413)
Molecular Weight	48.76 kDA(-cTP )
PI	9.09(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data