PPDB

 The Plant Proteome Database

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AT3G24590.1   plastidic type i signal peptidase 1
Lab Annot. Plsp1 (processes TOC75 and lumenal OEC23& 33,PC)
Mapman: 29.5.5.6* protein.degradation.serine protease SF.S26
Curated Location envelope (Pubmed: 23198870 20097790 18431481 ) (supported by in-house exprements)
thylakoid-peripheral-lumenal-side (Pubmed: 23198870 20097790 18431481 ) (supported by in-house exprements)

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G24590.2 11Arabidopsis thaliana02911001000 (0)M
AT1G06870.1 11Arabidopsis thaliana4E-7717465790 (0)M
AT2G30440.1 11Arabidopsis thaliana9E-7721656700 (0)M
Os02g16709.1 7Oryza sativa3E-106181798929 (29)C
Os09g28000.1 7Oryza sativa8E-8119060760 (0)M
Os03g55640.1 7Oryza sativa6E-7818462780 (0)M
Zm00001eb237700_P003 agpv5Zea mays8E-10718476894 (4)C
GRMZM2G039930_P02 3.21Zea mays8E-107184768956 (56)C
Zm00001eb237700_P002 agpv5Zea mays2E-10418476894 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Peptidase_S26(1)
TargetP: Chloroplast (Class 1 C0.879; M0.029; S0.060; _0.070)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 291 aa (-cTP 224)
Molecular Weight 32.55 kDA(-cTP 24.84)
PI 5.74(-cTP 4.76)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
105Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
107Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1494Detail       leaf [A. thaliana]  
1521Detail       leaf [A. thaliana] wild-type
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1928Detail       Rosettes [A. thaliana] Thylakoids wild-type
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
15322131(Thylakoid-stripped)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19995723(chloroplast reference proteome)

Comparative Proteomics Data

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