PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G24520.1   heat shock transcription factor C1

Lab Annot.
Mapman: 27.3.23 RNA.regulation of transcription.HSF,Heat-shock transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17750.1 11Arabidopsis thaliana4E-5324938590 (0)_
AT2G26150.4 11Arabidopsis thaliana7E-5322042610 (0)_
AT2G26150.1 11Arabidopsis thaliana7E-5322042610 (0)_
Os01g53220.1 7Oryza sativa9E-6420050660 (0)_
Os02g13800.1 7Oryza sativa1E-6118053670 (0)_
Os01g43590.2 7Oryza sativa2E-5822843580 (0)_
v1_GRMZM2G105348_P01 4a53Zea mays1E-6318153700 (0)_
Zm00001eb239380_P001 agpv5Zea mays1E-6318153700 (0)_
GRMZM2G105348_P01 3.21Zea mays1E-6318153700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adeno_100(1) Cauli_DNA-bind(1) CCDC-167(1) DivIC(2) FlaC_arch(2) HSF_DNA-bind(1)
TargetP: Cytoplasm (Class 2 C0.094; M0.060; S0.153; _0.897)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 254)
Molecular Weight 37.71 kDA(-cTP )
PI 5.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help