PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G24350.1 syntaxin of plants 32

Lab Annot.

SYP32 (syntaxin 32); SNAP receptor
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G24350.2 11 Arabidopsis thaliana 0 361 95 96 3 (1) _
AT5G05760.1 11 Arabidopsis thaliana 3E-91 349 47 64 0 (0) _
Os01g08400.1 7 Oryza sativa 2E-128 355 60 72 10 (10) C
Zm00001eb122290_P001 agpv5 Zea mays 3E-133 352 61 74 0 (0) C
GRMZM2G083518_P01 3.21 Zea mays 3E-133 352 61 74 4 (4) C
v1_GRMZM2G083518_P01 4a53 Zea mays 3E-133 352 61 74 4 (4) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ALMT(2) ATF7IP_BD(1) DUF4407(1) Prominin(2) SNARE(1) SUIM_assoc(2) Syntaxin(2)
TargetP:	Cytoplasm (Class 5 C0.165; M0.421; S0.012; _0.465)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	347 aa (-cTP 345)
Molecular Weight	39.12 kDA(-cTP )
PI	8.69(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data