PPDB

PPDB	The Plant Proteome Database

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AT3G24130.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.8.1 cell wall.pectin*esterases.PME

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G18990.1 11 Arabidopsis thaliana 0 333 83 88 0 (0) S
AT2G47280.1 11 Arabidopsis thaliana 1E-90 301 46 60 0 (0) S
AT2G19150.1 11 Arabidopsis thaliana 2E-87 303 43 59 0 (0) S
Os01g19440.1 7 Oryza sativa 4E-91 337 43 59 0 (0) S
Os07g46190.1 7 Oryza sativa 1E-65 264 42 57 0 (0) M
Os03g19610.1 7 Oryza sativa 2E-64 287 37 55 0 (0) M
GRMZM2G121278_P01 3.21 Zea mays 4E-87 308 44 62 0 (0) M
v1_GRMZM2G121278_P01 4a53 Zea mays 4E-87 308 44 62 0 (0) M
Zm00001eb340380_P001 agpv5 Zea mays 5E-72 338 39 55 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Pectinesterase(1) Pentapeptide_3(2)
TargetP:	Secreted (Class 1 C0.002; M0.082; S0.980; _0.078)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	335 aa (-cTP 268)
Molecular Weight	37.27 kDA(-cTP )
PI	8.75(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data