PPDB

PPDB	The Plant Proteome Database

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AT3G23900.1 RNA recognition motif (RRM)-containing protein

Lab Annot.

RNA recognition motif (RRM)-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23900.4 11 Arabidopsis thaliana 0 987 100 100 0 (0) _
AT3G23900.3 11 Arabidopsis thaliana 0 987 100 100 3 (3) _
AT3G23900.2 11 Arabidopsis thaliana 0 928 100 100 3 (3) _
Os01g01150.2 7 Oryza sativa 7E-147 597 59 73 17 (17) _
Os01g01150.3 7 Oryza sativa 7E-147 597 59 73 17 (17) _
Os01g01150.1 7 Oryza sativa 7E-147 597 59 73 17 (17) _
Zm00001eb127130_P007 agpv5 Zea mays 3E-147 912 46 60 0 (0) _
Zm00001eb127130_P006 agpv5 Zea mays 3E-147 912 46 60 0 (0) _
v1_GRMZM2G132936_P02 4a53 Zea mays 3E-147 912 46 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Filamin(1) Nup35_RRM_2(1) RRM_1(1) RRM_5(1) RRM_occluded(1)
TargetP:	Cytoplasm (Class 2 C0.092; M0.150; S0.119; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	987 aa (-cTP 955)
Molecular Weight	108.79 kDA(-cTP )
PI	10.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data