PPDB

 The Plant Proteome Database

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AT3G23890.1   topoisomerase II
Lab Annot. topoisomerase II
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
TAIR curated location: nucleus7838729
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23890.2 11Arabidopsis thaliana0147397972 (2)M
AT3G10270.1 11Arabidopsis thaliana9E-28592254333 (28)M
AT3G10270.2 11Arabidopsis thaliana1E-2759225430 (0)M
Os02g47150.1 7Oryza sativa0155058712 (2)_
Os01g13310.1 7Oryza sativa5E-12837955680 (0)M
Os01g16290.1 7Oryza sativa2E-29699244018 (18)C
v1_GRMZM2G021270_P01 4a53Zea mays01456617310 (10)_
Zm00001eb251620_P001 agpv5Zea mays0145661730 (0)_
GRMZM2G021270_P01 3.21Zea mays0145661738 (8)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DNA_gyraseB(1) DNA_topoisoIV(1) HATPase_c(1) PH_12(2) Toprim(1) TOPRIM_C(1)
TargetP: Mitochondria (Class 5 C0.326; M0.353; S0.091; _0.217)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1473 aa (-cTP 1450)
Molecular Weight 164.11 kDA(-cTP )
PI 7.25(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1018Detail        [aphid]  
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

 17216043(leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help