PPDB

PPDB	The Plant Proteome Database

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AT3G23780.1 nuclear RNA polymerase D2A

Lab Annot.

Mapman: 27.2 RNA.transcription

Curated Location

TAIR curated location: nuclear heterochromatin & nucleus15766525,16140984

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23780.2 11 Arabidopsis thaliana 0 1172 100 100 0 (0) _
AT3G18090.1 11 Arabidopsis thaliana 0 1052 95 97 0 (0) _
AT3G18090.2 11 Arabidopsis thaliana 0 889 94 96 0 (0) _
Os04g54840.1 7 Oryza sativa 0 1189 57 73 0 (0) _
Os08g07480.1 7 Oryza sativa 0 1170 54 72 0 (0) _
Os03g28960.2 6 Oryza sativa 2E-109 1058 28 47 0 (0) _
GRMZM2G133512_P01 3.21 Zea mays 0 1206 53 70 0 (0) _
v1_GRMZM2G133512_P01 4a53 Zea mays 0 1206 53 70 0 (0) _
Zm00001eb415030_P002 agpv5 Zea mays 0 1199 52 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2002(2) DUF4483(1) RNA_pol_Rpb2_1(1) RNA_pol_Rpb2_2(1) RNA_pol_Rpb2_3(1) RNA_
TargetP:	Cytoplasm (Class 2 C0.040; M0.058; S0.214; _0.952)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	1172 aa (-cTP 1093)
Molecular Weight	132.65 kDA(-cTP )
PI	8.62(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data