PPDB

The Plant Proteome Database

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AT3G23690.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot. basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G48560.2 11Arabidopsis thaliana6E-5817460770 (0)_
AT5G48560.1 11Arabidopsis thaliana1E-5717460770 (0)_
AT1G68920.3 11Arabidopsis thaliana1E-5224548610 (0)_
Os01g68700.2 7Oryza sativa2E-6034340530 (0)_
Os01g68700.1 7Oryza sativa3E-5733240520 (0)_
Os09g32510.5 7Oryza sativa2E-4812268810 (0)_
Zm00001eb143520_P002 agpv5Zea mays4E-5525647580 (0)_
v1_GRMZM2G180406_P02 4a53Zea mays4E-5525647580 (0)_
v1_GRMZM2G180406_P01 4a53Zea mays4E-5525647580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) RAP1(1)
TargetP: Cytoplasm (Class 1 C0.079; M0.102; S0.021; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 371 aa (-cTP 281)
Molecular Weight 40.76 kDA(-cTP )
PI 5.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help