PPDB

PPDB	The Plant Proteome Database

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AT3G23640.1 heteroglycan glucosidase 1

Lab Annot.

heteroglycan glucosidase 1 (HGL1)
Mapman: 2.2.2.1 major CHO metabolism.degradation.starch.starch cleavage

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23640.3 11 Arabidopsis thaliana 0 991 100 100 0 (0) C
AT3G23640.2 11 Arabidopsis thaliana 0 991 100 100 26 (13) _
AT5G63840.1 11 Arabidopsis thaliana 6E-99 586 34 52 100 (82) S
Os07g23880.1 7 Oryza sativa 0 965 68 81 17 (17) C
Os07g23944.1 7 Oryza sativa 0 970 62 77 0 (0) _
Os03g11720.1 7 Oryza sativa 1E-102 508 36 53 26 (26) M
Zm00001eb096920_P003 agpv5 Zea mays 0 975 68 81 0 (0) C
Zm00001eb305980_P002 agpv5 Zea mays 0 972 67 81 0 (0) C
Zm00001eb096920_P002 agpv5 Zea mays 0 938 69 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5110(1) Gal_mutarotas_2(1) GHL15(1) Glyco_hydro_31(1) Gsf2(1)
TargetP:	Cytoplasm (Class 2 C0.123; M0.043; S0.079; _0.906)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	991 aa (-cTP 933)
Molecular Weight	110.88 kDA(-cTP )
PI	5.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
869	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
870	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2112	Detail								leaf [A. thaliana]	Stroma stroma	wt

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data