PPDB

The Plant Proteome Database

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AT3G23620.1   Ribosomal RNA processing Brix domain protein

Lab Annot. brix domain-containing protein
Mapman: 29.2.2.50 protein.synthesis.misc ribososomal protein.BRIX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g33030.1 7Oryza sativa3E-14731163810 (0)M
Os05g43130.1 7Oryza sativa5E-409469820 (0)_
Zm00001eb255650_P001 agpv5Zea mays5E-14731163810 (0)M
GRMZM2G069518_P01 3.21Zea mays4E-14631163816 (6)M
Zm00001eb292270_P001 agpv5Zea mays4E-14631163810 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Brix(1)
TargetP: Cytoplasm (Class 4 C0.298; M0.141; S0.021; _0.671)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 314 aa (-cTP 255)
Molecular Weight 35.73 kDA(-cTP )
PI 9.74(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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