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PPDB	The Plant Proteome Database

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AT3G23590.1 REF4-related 1

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G48110.1 11 Arabidopsis thaliana 0 1337 50 66 0 (0) _
Os07g11000.1 7 Oryza sativa 0 1306 51 68 0 (0) _
Os07g48350.1 7 Oryza sativa 0 1323 38 59 0 (0) _
Os05g24684.1 7 Oryza sativa 0 1296 39 57 0 (0) C
v1_GRMZM2G106790_P01 4a53 Zea mays 0 1288 39 59 1 (1) _
Zm00001eb330790_P003 agpv5 Zea mays 0 1273 39 59 0 (0) _
Zm00001eb111630_P003 agpv5 Zea mays 0 1309 38 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alliinase_C(1) DUF2272(1)
TargetP:	Cytoplasm (Class 2 C0.003; M0.265; S0.169; _0.907)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	5 TMs
TAT position:
Length	1309 aa (-cTP 1279)
Molecular Weight	143.09 kDA(-cTP )
PI	6.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
2041	Detail								Total leaf [A. thaliana]	chloroplast stroma	wt and icp55c-3
2042	Detail								Total leaf [A. thaliana]	chloroplast stroma	wt and icp55c-3
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data