PPDB

PPDB	The Plant Proteome Database

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AT3G23390.1 Zinc-binding ribosomal protein family protein

Lab Annot.

Mapman: 29.2.1.2.2.536 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G14320.1 11 Arabidopsis thaliana 4E-72 105 100 100 3 (3) _
AT4G14320.2 11 Arabidopsis thaliana 2E-62 93 100 100 0 (0) _
Os07g33898.1 7 Oryza sativa 8E-68 105 93 98 0 (0) _
Os07g33880.1 6 Oryza sativa 8E-68 105 93 98 0 (0) _
Os07g33997.1 7 Oryza sativa 8E-68 105 93 98 0 (0) _
GRMZM2G160351_P02 3.21 Zea mays 8E-68 105 93 98 0 (0) _
GRMZM2G160351_P01 3.21 Zea mays 8E-68 105 93 98 0 (0) _
v1_GRMZM2G160351_P01 4a53 Zea mays 8E-68 105 93 98 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ribosomal_L44(1) RSF(1)
TargetP:	Cytoplasm (Class 2 C0.174; M0.119; S0.065; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	105 aa (-cTP 44)
Molecular Weight	12.13 kDA(-cTP )
PI	10.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2256	Detail								leaf [A. thaliana]	total seedlings	gfs9
2259	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
19200160(flower-stage 12)
17216043(leaf)
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
21325567(root-proteome (wt & det3))

Comparative Proteomics Data