PPDB

PPDB	The Plant Proteome Database

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AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23330.2 11 Arabidopsis thaliana 0 559 99 99 0 (0) _
AT3G12770.1 11 Arabidopsis thaliana 0 721 36 59 0 (0) _
AT1G20230.1 11 Arabidopsis thaliana 0 739 36 58 0 (0) _
Os07g39090.1 7 Oryza sativa 0 636 45 63 0 (0) C
Os01g10800.1 7 Oryza sativa 1E-171 671 38 59 2 (2) C
Os03g56400.1 7 Oryza sativa 2E-171 706 36 57 0 (0) _
GRMZM2G331779_P01 3.21 Zea mays 0 646 51 68 0 (0) C
v1_GRMZM2G331779_P01 4a53 Zea mays 0 646 51 68 0 (0) C
Zm00001eb077560_P002 agpv5 Zea mays 0 646 51 68 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) DYW_deaminase(1) PPR(11) PPR_1(7) PPR_2(11) PPR_3(6) PPR_long(4) SPOB_
TargetP:	Cytoplasm (Class 5 C0.300; M0.056; S0.006; _0.301)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	715 aa (-cTP 682)
Molecular Weight	80.06 kDA(-cTP )
PI	8.99(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data