PPDB

PPDB	The Plant Proteome Database

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AT3G23100.1 DNA ligase IV-binding protein

Lab Annot.

homolog of human DNA ligase iv-binding protein XRCC4
Mapman: 28.2 DNA.repair

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23100.2 11 Arabidopsis thaliana 0 264 100 100 0 (0) _
AT1G61410.1 11 Arabidopsis thaliana 5E-69 118 93 97 0 (0) _
Os03g53000.1 7 Oryza sativa 6E-88 248 52 70 0 (0) _
GRMZM2G001869_P01 3.21 Zea mays 5E-83 270 50 67 0 (0) _
Zm00001eb056730_P001 agpv5 Zea mays 5E-83 270 50 67 0 (0) _
v1_GRMZM2G001869_P01 4a53 Zea mays 5E-83 270 50 67 0 (0) _

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	VPS38(1) XLF(2) XRCC4(1)
TargetP:	Cytoplasm (Class 2 C0.131; M0.060; S0.141; _0.876)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	264 aa (-cTP 249)
Molecular Weight	29.85 kDA(-cTP )
PI	5.28(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data