PPDB

PPDB	The Plant Proteome Database

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AT3G23060.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23060.2 11 Arabidopsis thaliana 0 480 98 98 0 (0) _
AT2G30580.3 11 Arabidopsis thaliana 2E-26 127 44 64 0 (0) _
AT1G06770.2 11 Arabidopsis thaliana 2E-26 118 47 65 0 (0) M
Os03g53080.1 7 Oryza sativa 9E-39 486 27 44 0 (0) M
Os03g43360.1 6 Oryza sativa 3E-21 111 46 63 0 (0) _
Os03g58390.1 7 Oryza sativa 2E-20 113 41 61 0 (0) _
v1_GRMZM2G180195_P02 4a53 Zea mays 1E-19 118 40 61 0 (0) _
GRMZM2G180195_P02 3.21 Zea mays 1E-19 118 40 61 1 (1) _
Zm00001eb031130_P001 agpv5 Zea mays 1E-19 118 40 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5810(2) Prok-RING_4(2) RAWUL(1) Siva(1) YdjO(2) zf-C3HC4(1) zf-C3HC4_2(1) zf-
TargetP:	Cytoplasm (Class 3 C0.055; M0.063; S0.133; _0.561)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	480 aa (-cTP 411)
Molecular Weight	53.66 kDA(-cTP )
PI	8.60(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data