PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G22845.1   emp24/gp25L/p24 family/GOLD family protein

Lab Annot. emp24/gp25L/p24 family/GOLD protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22845.2 11Arabidopsis thaliana1E-971341001000 (0)S
AT3G07680.1 11Arabidopsis thaliana2E-34203335110 (7)S
AT1G57620.1 11Arabidopsis thaliana7E-1521424470 (0)S
Os03g53310.1 7Oryza sativa4E-11618880880 (0)S
Os08g42050.1 7Oryza sativa9E-38203365421 (21)S
Os09g32968.1 7Oryza sativa2E-3220234512 (2)S
GRMZM2G009895_P01 3.21Zea mays3E-11821174830 (0)S
Zm00001eb056960_P001 agpv5Zea mays3E-11821174830 (0)S
v1_GRMZM2G009895_P01 4a53Zea mays3E-11821174830 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: EMP24_GP25L(1)
TargetP: Secreted (Class 1 C0.003; M0.065; S0.989; _0.038)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 214 aa (-cTP 133)
Molecular Weight 24.28 kDA(-cTP )
PI 6.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1699Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help