PPDB

PPDB	The Plant Proteome Database

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AT3G22690.1 LOW protein: PPR containing-like protein

Lab Annot.

YS1 - DYW and PPR protein - editing rpoB
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 19934379 19054358 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G22690.2 11 Arabidopsis thaliana 0 841 100 100 0 (0) C
AT3G22690.3 11 Arabidopsis thaliana 0 841 96 96 0 (0) C
AT2G29760.1 11 Arabidopsis thaliana 1E-179 690 37 60 1 (0) C
Os01g25270.1 7 Oryza sativa 9E-166 790 35 54 0 (0) M
Os03g27880.1 7 Oryza sativa 7E-165 713 37 57 0 (0) M
Os09g07780.1 7 Oryza sativa 1E-163 808 34 53 0 (0) M
v1_GRMZM2G340279_P01 4a53 Zea mays 1E-163 716 37 56 0 (0) _
GRMZM2G340279_P01 3.21 Zea mays 1E-163 716 37 56 0 (0) _
Zm00001eb019320_P001 agpv5 Zea mays 1E-163 716 37 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_lid_7(3) DUF1685(2) DYW_deaminase(1) PPR(16) PPR_1(13) PPR_2(14) PPR_3(12) P
TargetP:	Chloroplast (Class 3 C0.603; M0.064; S0.063; _0.126)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	938 aa (-cTP 908)
Molecular Weight	104.22 kDA(-cTP 101.04)
PI	5.81(-cTP 5.67)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data