PPDB

The Plant Proteome Database

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AT3G22620.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot. protease inhibitor/seed storage/lipid transfer protein (LTP) family similar to pEARLI 1
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05450.2 11Arabidopsis thaliana2E-3418245620 (0)S
AT2G48140.1 11Arabidopsis thaliana1E-3020439540 (0)_
AT2G48140.2 11Arabidopsis thaliana2E-2711649670 (0)_
Os03g57980.1 7Oryza sativa1E-229945620 (0)S
Os07g07920.1 7Oryza sativa6E-159642590 (0)S
Os03g57990.1 7Oryza sativa1E-0713232520 (0)S
GRMZM2G005991_P02 3.21Zea mays3E-2510746640 (0)M
Zm00001eb060480_P004 agpv5Zea mays3E-2510746640 (0)M
v1_GRMZM2G005991_P02 4a53Zea mays3E-2510746640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LTP_2(1) Prolamin_like(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 5 C0.134; M0.026; S0.281; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 203 aa (-cTP 130)
Molecular Weight 20.78 kDA(-cTP )
PI 6.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
135Detail       leaf [A. thaliana] plastid thylakoid membranewild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

12766230(Total chloroplast envelope)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help