PPDB

The Plant Proteome Database

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AT3G22590.1   PLANT HOMOLOGOUS TO PARAFIBROMIN

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g46190.2 7Oryza sativa9E-11342047600 (0)_
Os03g46190.1 7Oryza sativa9E-11342047600 (0)_
Zm00001eb217880_P001 agpv5Zea mays4E-11642946590 (0)_
Zm00001eb217880_P002 agpv5Zea mays4E-11642946590 (0)_
GRMZM2G176688_P02 3.21Zea mays4E-11642946591 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: bZIP_Maf(2) CDC73_C(2) CDC73_N(2)
TargetP: Cytoplasm (Class 2 C0.103; M0.194; S0.074; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 415 aa (-cTP 379)
Molecular Weight 47.54 kDA(-cTP )
PI 7.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2257Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help