PPDB

The Plant Proteome Database

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AT3G22490.1   Seed maturation protein

Lab Annot. Seed maturation protein
Mapman: 33.2 development.late embryogenesis abundant
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22500.1 11Arabidopsis thaliana1E-14126279856 (4)_
AT5G27980.1 11Arabidopsis thaliana9E-4312965770 (0)_
AT1G03120.1 11Arabidopsis thaliana6E-3112454700 (0)_
Os03g06360.1 7Oryza sativa3E-5227253620 (0)_
Os06g23350.1 7Oryza sativa1E-5025347600 (0)_
Os03g53610.1 7Oryza sativa3E-2821043540 (0)_
Zm00001eb057120_P001 agpv5Zea mays2E-7326753670 (0)_
GRMZM2G025857_P01 3.21Zea mays2E-7326753670 (0)_
v1_GRMZM2G025857_P01 4a53Zea mays2E-7326753670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SMP(4)
TargetP: Cytoplasm (Class 2 C0.106; M0.133; S0.052; _0.894)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 262 aa (-cTP 174)
Molecular Weight 26.74 kDA(-cTP )
PI 4.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help