PPDB

The Plant Proteome Database

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AT3G22470.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22470.2 11Arabidopsis thaliana062979840 (0)M
AT1G12300.1 11Arabidopsis thaliana063668821 (1)M
AT1G12620.1 11Arabidopsis thaliana059469831 (1)M
Os10g35240.1 7Oryza sativa3E-11056833540 (0)M
Os10g35240.2 7Oryza sativa3E-11056833540 (0)M
Os08g01640.1 7Oryza sativa2E-10056333540 (0)M
v1_GRMZM2G431850_P01 4a53Zea mays2E-10556332560 (0)M
GRMZM2G431850_P01 3.21Zea mays2E-10556332560 (0)M
Zm00001eb345130_P001 agpv5Zea mays2E-10556332560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ADK(1) AEP1(3) ATP13(4) B12-binding_2(3) Coat_F(2) DUF3368(4) HARE-HTH(2) MRP-S2
TargetP: Mitochondria (Class 4 C0.169; M0.581; S0.031; _0.227)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 619 aa (-cTP 587)
Molecular Weight 69.10 kDA(-cTP )
PI 5.71(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help