PPDB

The Plant Proteome Database

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AT3G22231.1   pathogen and circadian controlled 1

Lab Annot. pathogen and circadian controlled 1
Mapman: 20.1 stress.biotic
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22235.1 11Arabidopsis thaliana7E-345698981 (1)C
AT3G22235.2 11Arabidopsis thaliana7E-345698981 (1)C
AT3G22240.1 11Arabidopsis thaliana6E-255184920 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CYSTM(2)
TargetP: Chloroplast (Class 5 C0.437; M0.164; S0.098; _0.287)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 81 aa (-cTP 40)
Molecular Weight 8.48 kDA(-cTP 4.13)
PI 4.39(-cTP 4.33)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1113Detail        [A. thaliana] control for RARE-1 co-IP wild-type
1398Detail       leaf [A. thaliana] total leaf tissue 1.14 Prep1_Prep2

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
15308754(plasma membrane (phosphorylated))
19376835(leaf phosphoproteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help