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The Plant Proteome Database

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AT3G22230.1   Ribosomal L27e protein family

Lab Annot. 60S ribosomal protein L27 (RPL27B)
Mapman: 29.2.1.2.2.27 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15000.1 11Arabidopsis thaliana1E-901359697131 (102)M
AT2G32220.1 11Arabidopsis thaliana3E-8013583910 (0)_
AT4G15000.2 11Arabidopsis thaliana7E-801239596116 (87)M
Os10g41470.1 7Oryza sativa8E-75136808829 (29)M
Os02g18380.1 7Oryza sativa3E-68137788836 (36)M
v1_GRMZM2G302712_P01 4a53Zea mays7E-75137798867 (66)C
Zm00001eb070200_P001 agpv5Zea mays7E-7513779880 (0)C
GRMZM2G302712_P01 3.21Zea mays7E-75137798874 (69)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: KOW(1) Ribosomal_L27e(1)
TargetP: Mitochondria (Class 4 C0.037; M0.558; S0.204; _0.164)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 135 aa (-cTP 38)
Molecular Weight 15.61 kDA(-cTP )
PI 10.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1749Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2050Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2053Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2064Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2069Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2074Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15734919(80S cytolic ribosomes)
17934214(cytosolic ribosome)
19546170(mature pollen grains)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19888209(leaves)
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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