PPDB

The Plant Proteome Database

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AT3G22220.1   hAT transposon superfamily

Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22220.4 11Arabidopsis thaliana07611001000 (0)_
AT3G22220.3 11Arabidopsis thaliana07611001000 (0)_
AT3G22220.2 11Arabidopsis thaliana07611001001 (1)_
Os03g60800.1 7Oryza sativa2E-17574837560 (0)_
Os09g32380.1 7Oryza sativa9E-11873134490 (0)_
Os12g35120.1 7Oryza sativa7E-8568831500 (0)_
GRMZM2G362557_P01 3.21Zea mays7E-7567128470 (0)_
v1_GRMZM2G046753_P01 4a53Zea mays5E-7352931490 (0)_
v1_GRMZM2G386025_P01 4a53Zea mays7E-3834431480 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Dimer_Tnp_hAT(1) DUF659(3) zf-BED(1)
TargetP: Cytoplasm (Class 1 C0.084; M0.089; S0.041; _0.955)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 761 aa (-cTP 753)
Molecular Weight 86.39 kDA(-cTP )
PI 5.48(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1724Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help