PPDB

The Plant Proteome Database

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AT3G21850.1   SKP1-like 9

Lab Annot. SKP1-like 9
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21860.1 11Arabidopsis thaliana2E-9015384880 (0)_
AT3G21830.1 11Arabidopsis thaliana6E-8315377860 (0)_
AT4G34470.1 11Arabidopsis thaliana5E-7315368800 (0)S
Os07g05160.1 7Oryza sativa6E-5215854710 (0)_
Os09g36830.1 7Oryza sativa1E-50167556717 (17)_
Os08g28820.1 7Oryza sativa5E-5016048660 (0)_
Zm00001eb146340_P001 agpv5Zea mays2E-5216653650 (0)_
Zm00001eb114920_P001 agpv5Zea mays5E-5216355690 (0)_
GRMZM2G009106_P01 3.21Zea mays1E-5116354690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Skp1(2) Skp1_POZ(1)
TargetP: Cytoplasm (Class 4 C0.114; M0.056; S0.412; _0.717)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 153 aa (-cTP 134)
Molecular Weight 17.44 kDA(-cTP )
PI 4.74(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help