PPDB

The Plant Proteome Database

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AT3G21770.1   Peroxidase superfamily protein

Lab Annot. peroxidase 30 (PER30) (P30) (PRXR9)
Mapman: 26.12 misc.peroxidases
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta) & nucleus & cytoplasm15610358,16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05260.1 11Arabidopsis thaliana9E-177322738210 (10)S
AT4G11290.1 11Arabidopsis thaliana3E-15532463785 (5)S
AT3G01190.1 11Arabidopsis thaliana7E-11331852665 (5)S
Os06g46799.1 7Oryza sativa9E-12630256730 (0)S
Os07g01370.1 7Oryza sativa3E-12130356710 (0)M
Os11g43980.1 7Oryza sativa1E-11932652690 (0)S
Zm00001eb225230_P002 agpv5Zea mays5E-13430461750 (0)S
Zm00001eb225230_P001 agpv5Zea mays5E-13430461750 (0)S
v1_GRMZM2G085967_P01 4a53Zea mays5E-134304617523 (23)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: peroxidase(1)
TargetP: Secreted (Class 1 C0.002; M0.068; S0.967; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 329 aa (-cTP 306)
Molecular Weight 35.79 kDA(-cTP )
PI 9.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
16287169(Cell Wall proteome)
18436743(specific to roots)
18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help