PPDB

 The Plant Proteome Database

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AT3G21740.1   APO RNA-binding protein (DUF794)
Lab Annot. APO4 (ACCUMULATION OF PHOTOSYSTEM ONE 4)
Mapman: 29.8 protein.protein assembly and cofactor ligation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G57930.1 11Arabidopsis thaliana6E-6030337512 (0)C
AT5G57930.2 11Arabidopsis thaliana6E-6030337512 (0)C
AT1G64810.1 11Arabidopsis thaliana6E-5836333481 (1)_
Os04g53612.1 7Oryza sativa9E-11829555730 (0)M
Os04g52520.1 7Oryza sativa3E-5831835501 (1)_
Os04g52520.3 7Oryza sativa7E-5831835501 (1)_
Zm00001eb071730_P001 agpv5Zea mays4E-12030754700 (0)M
v1_GRMZM2G156581_P02 4a53Zea mays4E-12030754700 (0)M
GRMZM2G156581_P02 3.21Zea mays4E-12030754700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Aida_N(1) APO_RNA-bind(2) zf-CCHC_2(2)
TargetP: Mitochondria (Class 1 C0.114; M0.927; S0.002; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 337 aa (-cTP 320)
Molecular Weight 38.54 kDA(-cTP )
PI 9.35(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help