PPDB

The Plant Proteome Database

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AT3G21550.1   transmembrane protein%2C putative (DUF679 domain membrane protein 2)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21520.1 11Arabidopsis thaliana2E-5917849660 (0)_
AT4G18425.1 11Arabidopsis thaliana1E-4317244580 (0)_
AT5G46090.1 11Arabidopsis thaliana9E-4317245560 (0)_
Os03g25440.1 7Oryza sativa4E-5517950670 (0)_
Os07g45080.1 7Oryza sativa2E-4618246590 (0)_
Os05g48840.1 7Oryza sativa3E-4318044560 (0)C
v1_GRMZM2G313529_P01 4a53Zea mays7E-6717953700 (0)M
GRMZM2G313529_P01 3.21Zea mays7E-6717953700 (0)M
AC196465.3_FGP002 3.21Zea mays6E-4417644560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF679(1)
TargetP: Cytoplasm (Class 3 C0.008; M0.352; S0.129; _0.870)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 184 aa (-cTP 118)
Molecular Weight 20.17 kDA(-cTP )
PI 8.55(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help