PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G21520.1   transmembrane protein%2C putative (DUF679 domain membrane protein 1)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21550.1 11Arabidopsis thaliana2E-5917849662 (2)_
AT3G02430.1 11Arabidopsis thaliana1E-3919140570 (0)C
AT4G24310.1 11Arabidopsis thaliana1E-3919939570 (0)C
Os03g25440.1 7Oryza sativa1E-4918045660 (0)_
Os07g45080.1 7Oryza sativa1E-4618942610 (0)_
Os05g48840.1 7Oryza sativa5E-3716140570 (0)C
v1_GRMZM2G313529_P01 4a53Zea mays6E-5616947660 (0)M
GRMZM2G313529_P01 3.21Zea mays6E-5616947660 (0)M
GRMZM5G812126_P01 3.21Zea mays8E-3615837580 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF679(1)
TargetP: Cytoplasm (Class 4 C0.581; M0.019; S0.021; _0.782)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 207 aa (-cTP 187)
Molecular Weight 22.06 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help